geneId variants.cis LD best.snp best.nominal.pv shape1 shape2 nb.perms pv.emp pv.emp.beta runtime fdr_bh CFLAR 9 1 chr2:201134560:A:G 0.0495658196319022 1.02416153299286 1.96972419042432 1000 0.0989010989010989 0.0896299193236797 0.414039444923401 0.239013118196479 RPL31 2 1 chr2:101007283:T:A 0.86600786621444 1.0590892693347 1.26212912255214 112 0.893805309734513 0.915835427968755 0.0432154059410095 0.937381460013359 PCM1 3 1 chr8:17951221:A:G 0.0975707630068903 1.14725831802362 1.16019035063993 1000 0.0959040959040959 0.080779640023607 0.218820687135061 0.239013118196479 CELF2 20 1 chr10:11167039:A:G 0.396132942600207 1.04694838385224 1.91289865093048 160 0.627329192546584 0.602429888879069 0.0790432492891947 0.937381460013359 GAPDH 1 NA chr12:6535090:T:A 0.759273763514771 0.963546071250982 1.10057176306261 131 0.765151515151515 0.798454921999584 0.0478415052096049 0.937381460013359 GPATCH2L 20 1 chr14:76147335:T:C 0.169578709081201 1.11609984257597 1.10821338317707 644 0.156589147286822 0.152529268258024 0.144075504938761 0.305058536516048 KTN1 60 0.859375 chr14:55581063:C:T 0.638414807102062 0.843360516486929 2.49463898461377 106 0.94392523364486 0.937381460013359 0.108167139689128 0.937381460013359 MEG3 2 0.0576470588235294 chr14:100862402:C:T 0.0287477890466725 1.00452906848855 2.19779323730975 1000 0.0629370629370629 0.061262603843443 0.343748545646667 0.239013118196479