geneId variants.cis LD best.snp best.nominal.pv shape1 shape2 nb.perm pv.emp.perm pv.emp.beta runtime fdr_bh FAM153CP 53 0.280979156825889 chr5:178043305:C:G 0.000220392985336493 0.712157846669146 8.79481869304875 1000 0.014985014985015 0.0126873728399713 28.0768749594688 0.859453813475782 SRP19 87 0.751876065061071 chr5:112893991:T:C 0.00238618628099685 0.840060242178675 5.60671982374755 1000 0.032967032967033 0.0278265067156314 30.3296254634857 0.859453813475782 ST8SIA4 120 0.844002040044205 chr5:100896106:A:C 0.00331573348507586 0.910492633943925 5.0809157698274 1000 0.028971028971029 0.0247950002155432 26.5143464406331 0.859453813475782 TMEM161B 43 0.454619345931664 chr5:88188190:C:T 0.00513123744729549 0.813542952029501 4.13494619925792 1000 0.047952047952048 0.0453909190231841 14.3446865200996 0.859453813475782 KHDRBS2 850 0.185515122920269 chr6:61984409:C:T 0.000571905413271123 0.787002233195976 31.6613061905679 1000 0.041958041958042 0.0453821028522888 131.963656059901 0.859453813475782 SRSF3 12 0.827413977382112 chr6:36589803:C:A 0.0163703089729446 0.968635955030899 1.8883557649948 1000 0.036963036963037 0.0344181704531942 5.02149876356125 0.859453813475782 TMEM14B 14 0.653736212759499 chr6:10745994:T:C 0.00421552064045594 0.883635689369798 3.63113169383405 1000 0.02997002997003 0.0255470963656446 4.35218564669291 0.859453813475782 ZNF124 80 0.414112915575845 chr1:247176987:A:G 0.00112774711272934 0.761670278463622 8.51363861350501 1000 0.032967032967033 0.0310745966154693 62.295935912927 0.859453813475782 AUTS2 410 0.0206985763375759 chr7:70773872:G:C 0.000394335860986916 0.788436322213725 48.0337014340784 1000 0.038961038961039 0.0467555319517327 127.701003925006 0.859453813475782 DGKB 1211 0.00872389964607789 chr7:14272162:G:A 4.18138621800512e-05 0.71042384550379 152.342203224422 1000 0.032967032967033 0.0301454108532027 352.602074682713 0.859453813475782 ANXA11 58 0.526016848466303 chr10:80171685:C:T 0.000624025436717357 0.890886756305525 7.90169458263388 1000 0.010989010989011 0.00910909802288822 29.164955441157 0.859453813475782 ZNF138 145 0.540443751939874 chr7:64835067:G:A 0.000953013241981382 0.875509218149958 12.0160422077232 1000 0.021978021978022 0.0207523600378968 41.1178295930227 0.859453813475782 BIN3 76 0.272773449066026 chr8:22627344:GTCAC:G 0.0028633381829426 0.813178985722894 8.22853793497838 1000 0.044955044955045 0.0498347380407777 26.7270170728366 0.859453813475782 ERICH1 285 0.190550945397355 chr8:694673:G:C 0.000272257799052156 0.62824036586807 22.9666399276514 1000 0.047952047952048 0.0456463579137218 111.307091160615 0.859453813475782 PCMTD1 159 0.948891137287443 chr8:51904165:G:A 0.00784197952682564 0.904416228787398 3.59290657308702 1000 0.041958041958042 0.040277430110675 9.55080821911494 0.859453813475782 AKNA 70 0.228314008551251 chr9:114367312:T:A 0.00169465088898346 0.785171174411834 11.1355316360078 1000 0.046953046953047 0.0470256516073012 27.4268113414447 0.859453813475782 IFT74 18 0.324568362156613 chr9:26957913:A:C 0.00043898452677138 0.915816429972519 5.01172247007344 1000 0.004995004995005 0.00377566812902492 11.5786567370097 0.832552847822833 LGI1 49 0.037296928214571 chr10:93783192:C:A 0.000639391664562838 0.919626368110016 14.2380457574731 1000 0.00899100899100899 0.0136208317936387 22.0457917412122 0.859453813475782 LRRC27 95 0.479011005597168 chr10:132363774:C:G 0.00119812397944341 0.827250174445868 10.7137212319182 1000 0.020979020979021 0.028670541268475 48.502793610096 0.859453813475782 CAMTA1 1000 0.00494744121590194 chr1:7057375:A:T 4.95547529626439e-05 0.689703596450737 189.046221979517 1000 0.037962037962038 0.0438196613874868 866.76962154309 0.859453813475782 BACE1 27 0.354519370260678 chr11:117310205:T:C 0.000299918730056969 0.854288688456292 6.16351463331303 1000 0.00599400599400599 0.00483239629747913 18.509190261364 0.832552847822833 SVIP 22 0.460835692304411 chr11:22834793:A:G 0.000422568415255675 0.851614022030867 4.19986549944358 1000 0.00699300699300699 0.0047290005241829 9.05453189611435 0.832552847822833 TMEM126B 1 NA chr11:85628498:G:T 0.029328536256895 1.01221939227453 1.04439539748847 1000 0.025974025974026 0.0293284163519703 1.57274889151255 0.859453813475782 SLC38A1 71 0.0480839233971587 chr12:46206773:C:T 0.000452193692074609 0.852695710203044 18.1621896159859 1000 0.020979020979021 0.0174809441633613 44.9816494464874 0.859453813475782 SNRNP35 28 0.39252413089738 chr12:123475927:A:G 0.00472657376684404 0.891845346154369 3.59985970502076 1000 0.031968031968032 0.0270544538462209 16.4362916668256 0.859453813475782 BTBD7 64 0.922700025199127 chr14:93234542:CT:C 0.00355727760533209 0.827031310804749 4.26183895058373 1000 0.034965034965035 0.0326158198502347 18.2051527778308 0.859453813475782 FBXO34 132 0.669779549143091 chr14:55318019:G:C 0.00130352870995509 0.878188463944752 4.94191793968216 1000 0.015984015984016 0.0123172957682952 23.5856657862663 0.859453813475782 GPATCH2L 55 0.574094183355308 chr14:76150128:T:G 0.00184594231978596 0.839383193477022 4.29348957663293 1000 0.010989010989011 0.0179636186113275 16.4193892995516 0.859453813475782 SLC12A6 77 0.694524996022318 chr15:34287381:T:C 0.0055537305317559 0.907194403101365 5.51041160615812 1000 0.034965034965035 0.0430230007193738 22.1024552265803 0.859453813475782 TCF12 422 0.502064875658532 chr15:57200162:C:T 0.000165579652159797 0.794673417056667 9.8168747783268 1000 0.00799200799200799 0.0064760963490771 126.310695381959 0.859453813475782 KHDRBS1 2 0.480773699506821 chr1:32035614:A:G 0.0209504698936473 0.953233505540497 1.73816289837828 1000 0.04995004995005 0.0425070591753536 1.45373938481013 0.859453813475782 MBOAT7 27 0.0657444750804449 chr19:54171328:C:T 0.0025859968476486 0.89267161069632 9.98684207998538 1000 0.037962037962038 0.0392404552429795 18.9157497564952 0.859453813475782 PIP5K1C 53 0.273842467273654 chr19:3663221:C:CG 3.76059669848772e-07 0.792112640786558 9.2384268767429 1000 0.000999000999000999 5.05534127900672e-05 31.2178488691648 0.020322471941607 UBL5 7 0.508772527732013 chr19:9831447:G:T 0.0049540589185294 1.00621576541033 2.90164089484751 1000 0.010989010989011 0.0139121288728743 6.55935572385788 0.859453813475782 ZNF544 102 0.360435246660996 chr19:58279309:T:C 0.000292974422443582 0.819198050932776 13.444963954054 1000 0.00699300699300699 0.0113631399554716 44.9632963895798 0.859453813475782 ZNF585A 30 0.556106240584848 chr19:37143153:A:G 0.00666531592094977 0.910605748717883 3.82047600114003 1000 0.043956043956044 0.0359219733505242 14.5048302173614 0.859453813475782 ZNF875 49 0.187881552525752 chr19:37364937:C:A 0.00526442735874222 0.857987972602606 4.02149167117271 1000 0.03996003996004 0.0377658040606769 12.2048057595889 0.859453813475782 ACYP2 449 0.11358996222103 chr2:54206828:T:C 1.73122780466883e-06 0.695188910659278 28.3339258409816 1000 0.002997002997003 0.0011081720533615 242.091259328524 0.334113874088492 MIR4435-2HG 120 0.00978782267997075 chr2:111250139:A:G 0.000406111205623283 0.846256251215345 40.5442308437104 1000 0.031968031968032 0.0324851505181391 74.1318420529365 0.859453813475782 MRPL33 3 0.775646411116879 chr2:27772914:A:C 0.0173400345632825 0.968794311405931 1.69751976242191 1000 0.033966033966034 0.0328188746966184 3.58121624390284 0.859453813475782 PDE1A 457 0.0865800682434367 chr2:182475514:A:C 0.000251248950154714 0.777406403698942 32.1461751383924 1000 0.020979020979021 0.0253515578010928 194.857921985785 0.859453813475782 WDSUB1 132 0.730149685555779 chr2:159233810:C:T 0.00157071394628283 0.827775138374547 7.00109469987927 1000 0.02997002997003 0.0251022787914437 37.7163515686989 0.859453813475782 ATP2B4 87 0.0195115231356692 chr1:203690227:G:A 0.00016462416943086 0.889746182017122 24.4047185500071 1000 0.00999000999000999 0.007673339422265 68.4026894450188 0.859453813475782 CFAP298 4 0.481904024569086 chr21:32613743:A:G 0.0038040087558906 0.969855787050988 2.3948920476839 1000 0.012987012987013 0.0105397145023802 5.15648965040843 0.859453813475782 CCDC157 67 0.945016374330953 chr22:30360918:G:A 0.00307111756368306 0.929448535997837 5.7762541727346 1000 0.022977022977023 0.0239473612539053 18.8814124147097 0.859453813475782 NF2 104 0.218335047743755 chr22:29683224:T:C 0.00100229068954438 0.807699226647256 8.70226090935205 1000 0.026973026973027 0.0229735333438685 35.9061690409978 0.859453813475782 DUBR 113 0.217717417795469 chr3:107322159:C:T 0.000244906409358925 0.818024666094958 17.2035350221386 1000 0.010989010989011 0.0121011043956687 50.0240362564723 0.859453813475782 RPS27 5 0.426595149322337 chr1:153991519:A:AAG 0.0159405091628401 0.911662569545712 1.83040922646461 1000 0.04995004995005 0.0401950180408737 11.5111056407293 0.859453813475782 NDUFB5 23 0.684055277637419 chr3:179610170:G:A 0.00209018516963422 0.870822185291686 2.51053262092966 1000 0.012987012987013 0.0106151881886597 8.69169994990031 0.859453813475782 THUMPD3-AS1 17 0.595268779852366 chr3:9400053:G:A 0.00157130530159999 0.900370755812373 3.8058133288224 1000 0.011988011988012 0.0102151311896297 7.41005868911743 0.859453813475782 USP4 17 0.910697080915628 chr3:49287349:G:A 0.00920314152706103 0.951035148974378 2.97682948327414 1000 0.037962037962038 0.0327912584094164 6.32957810560862 0.859453813475782