geneId	variants.cis	LD	best.snp	best.nominal.pv	shape1	shape2	nb.perm	pv.emp.perm	pv.emp.beta	runtime	fdr_bh
CEP250	81	0.933521801112972	chr20:35520432:C:T	0.000369809446971514	0.981322332611606	4.25621858921566	1000	0.001998001998002	0.00178474786381065	25.8819667299589	0.350359757080146
C3orf14	12	0.225195732507865	chr3:62318645:G:C	0.00266739423431916	0.912909130509088	4.86671801307492	1000	0.028971028971029	0.0193624963414975	6.21919239759445	0.7812411586785
NISCH	58	0.932083480721613	chr3:52456375:A:G	0.00659557231826435	0.966012394318744	3.71196754463909	1000	0.040959040959041	0.0277992822961873	7.43197782437007	0.7812411586785
SS18L2	18	0.509146539473766	chr3:42594141:A:G	0.0106475921780725	0.917297677984464	3.33600369850555	1000	0.04995004995005	0.0472784957154292	5.80445611874262	0.876309469373782
UBE2E2	637	0.20381848510295	chr3:23468106:A:G	0.000656512070188908	0.788225481073577	28.8560951195312	1000	0.041958041958042	0.046754710849184	349.570722766717	0.876309469373782
XYLB	89	0.437149981927144	chr3:38417858:T:C	0.00117646518552861	0.8495366114411	11.7127336366837	1000	0.034965034965035	0.0274604778414103	22.9591212908427	0.7812411586785
PRIMPOL	21	0.519402300507917	chr4:184649521:G:C	0.00301524244181972	0.900969476788323	6.49712085289525	1000	0.03996003996004	0.029623323549092	20.7199501951536	0.7812411586785
RGS12	127	0.150480682631347	chr4:3413609:C:T	5.61494928510431e-05	0.869032833885615	21.9592333648589	1000	0.001998001998002	0.00310578413947355	92.5977239410083	0.445821196020794
RPS3A	1	NA	chr4:151098608:G:A	0.0163368452929901	0.988249430063779	1.01366737425098	1000	0.016983016983017	0.0173766694346358	1.84486184517543	0.7812411586785
SLC9B2	26	0.536204894479707	chr4:103041375:A:G	0.00753031814113325	0.922288943586975	3.31391214582796	1000	0.033966033966034	0.0336506937017464	13.5304567257563	0.805067353864509
ANKHD1	63	0.353412328659834	chr5:140518717:G:A	0.000793781785294323	0.801070295908666	3.98397036163091	1000	0.00899100899100899	0.010451161281298	17.0500471711159	0.646603782980686
FNIP1	110	0.672199969798894	chr5:131798207:G:A	0.00786247583160349	0.911732386793779	4.64625475782032	1000	0.037962037962038	0.0495497845807568	21.5430064360301	0.876309469373782
GUSBP14	1	NA	chr5:70047743:G:T	0.0598871339871425	1.04860430608305	1.05855765695831	1000	0.04995004995005	0.0552836974576564	1.70483200152715	0.876309469373782
LINC00461	84	0.186338233862941	chr5:88630237:C:T	0.00096482869504444	0.816871871036929	11.6930036647429	1000	0.022977022977023	0.0271027381330782	37.692229894797	0.7812411586785
AIG1	155	0.0609511664214471	chr6:143325646:C:T	5.5853272240558e-07	0.796517526322026	32.9184017614096	1000	0.000999000999000999	0.000181264293247222	106.120703601837	0.0572432638074727
AK9	455	0.377907507501633	chr6:109509855:T:C	0.00156337344356594	0.872272992344165	7.51903983920842	1000	0.022977022977023	0.0215074483851416	49.5799792965253	0.7812411586785
TCEANC2	27	0.438817002075276	chr1:54060872:C:T	0.00704537604773126	0.965133204010947	3.55903534243409	1000	0.036963036963037	0.028540942689208	7.55678284168243	0.7812411586785
DTNBP1	94	0.161548306395467	chr6:15623176:G:A	0.000112967056962954	0.807372964388763	11.9585943661983	1000	0.00799200799200799	0.00513169024562914	40.7620028932889	0.578781349846315
TIPRL	60	0.632499986016148	chr1:168175958:C:T	0.00258872068870786	0.822151944960316	4.9561794091925	1000	0.034965034965035	0.0291381758283584	27.1937470873197	0.7812411586785
MTRF1L	48	0.128644050093577	chr6:152983590:T:C	0.00247966625959584	0.863045503328962	5.7148207555465	1000	0.022977022977023	0.0263188375048611	19.0941798448563	0.7812411586785
SLC22A23	374	0.0142235186377444	chr6:3439276:T:C	2.46407610489108e-05	0.774233034014602	48.9471605346069	1000	0.00799200799200799	0.00593287184003467	184.993979644775	0.585500289713421
SOD2	122	0.28669491582198	chr6:159702393:T:C	0.00107324121019248	0.848782146494374	7.70688558409999	1000	0.010989010989011	0.0178623082381156	56.3797538201014	0.7812411586785
TRAF3IP2-AS1	103	0.163826207360792	chr6:111545104:A:G	1.03389366650219e-05	0.813731733319028	15.4261616562506	1000	0.000999000999000999	0.000865042876768777	55.5141046603521	0.227650450402983
USP45	88	0.354866574480143	chr6:99446484:CAAAGA:C	0.000107979128578295	0.776659034715214	7.00468091071592	1000	0.00699300699300699	0.00401866631733802	28.5096714576085	0.528789509589728
ASIC3	8	0.140868162641105	chr7:151051684:T:C	0.00942396549992641	1.00823883911479	4.90965971809679	1000	0.048951048951049	0.0441658869515008	2.2459956685702	0.875756566727283
ATXN7L1	274	0.0151416482009989	chr7:105696542:T:C	0.000292911640557114	0.828261595013628	84.2739993085919	1000	0.044955044955045	0.0490460284168865	109.106437933445	0.876309469373782
PILRB	2	1	chr7:100363571:A:G	0.0283970107976409	1.00183632192611	0.990298884620164	1000	0.026973026973027	0.0279417805089411	0.762282645702362	0.7812411586785
SBDSP1	4	0.382680136553858	chr7:72836963:C:T	0.00984380260541995	0.920235137388898	3.03023084327706	1000	0.042957042957043	0.0398905330054349	1.4506464044253	0.875756566727283
SUN1	142	0.217757549468526	chr7:853770:G:A	0.000270944599402911	0.852098426358406	12.4356361510432	1000	0.00899100899100899	0.00821151756515968	49.2354252576828	0.646603782980686
ZNF138	145	0.550038526318397	chr7:64861805:T:A	0.00047885257404201	0.838971749530274	11.0815659754432	1000	0.012987012987013	0.0129838907498637	42.8240342219671	0.692852582616592
PLPBP	2	0.178593375217161	chr8:37768085:A:G	0.00166742397879571	1.02594600821242	2.06404881096274	1000	0.002997002997003	0.00295241107314576	0.752621150016785	0.445821196020794
RMDN1	93	0.290672846074314	chr8:86467581:C:T	0.00119157758237265	0.829957550892064	5.65450042234372	1000	0.013986013986014	0.0165340316102455	17.7851575613022	0.7812411586785
ZNF678	142	0.385760120450588	chr1:227660259:G:T	0.00722157330974849	0.882904757659524	6.21576099881343	1000	0.04995004995005	0.0658095674437908	16.6900944391886	0.876309469373782
TUSC3	468	0.161333165043553	chr8:15551953:A:C	0.000311328673753608	0.726049040003638	33.0951709623245	1000	0.034965034965035	0.0392045461622003	222.78794897	0.875756566727283
ZFAND1	16	0.901523451442072	chr8:81699328:T:G	0.0117120211620427	0.926821636299223	2.11666713567877	1000	0.038961038961039	0.0327520482827144	5.92045896848043	0.805067353864509
CTNNAL1	47	0.774174685412506	chr9:109010638:G:T	0.00459032121021918	0.883374962040946	3.68439692688452	1000	0.031968031968032	0.0279215078457482	15.1946771542231	0.7812411586785
MVB12B	255	0.109781922712889	chr9:126399077:T:TC	5.99625539309256e-05	0.722338942291844	22.6705361152768	1000	0.00999000999000999	0.00926082987830777	62.9779080112775	0.646603782980686
RECK	81	0.437673928075732	chr9:36097139:C:T	0.00110425913821177	0.783915735032756	6.71304816826134	1000	0.018981018981019	0.0227232377195744	19.9437675038973	0.7812411586785
ERCC6	84	0.266865448148456	chr10:49490500:G:A	0.0034469784079284	0.886839722935945	6.33057859188166	1000	0.036963036963037	0.034568096368403	28.5016324003537	0.811264085387912
FGFR2	91	0.0379341123805534	chr10:121489149:C:T	0.000111920739579885	0.83323829782146	21.9376927534282	1000	0.00699300699300699	0.00708082371935174	67.5551160693169	0.621145591825355
MRPL43	9	0.449834008125235	chr10:100990864:C:T	0.00312047174628627	0.921063343593775	2.7368731831021	1000	0.013986013986014	0.0126405635216014	3.04728446801504	0.692852582616592
RASGEF1A	73	0.24386380401703	chr10:43250421:G:T	0.00205484082370422	0.803532155936593	11.0326863788973	1000	0.048951048951049	0.0503418820691742	37.5982071836789	0.876309469373782
SNCG	15	0.40523766113054	chr10:86957908:C:G	0.000145384230118006	0.851948209085054	4.44306904408745	1000	0.00699300699300699	0.00199698404922186	8.6297903974851	0.350359757080146
BACE1	31	0.312592390794624	chr11:117285836:T:C	0.00077620406672585	0.785983502581657	7.48410104815912	1000	0.017982017982018	0.0185963814990265	18.9562050660451	0.7812411586785
CPT1A	41	0.337273292307748	chr11:68824404:A:G	0.000522307089466212	0.880035019234643	8.34530152035149	1000	0.00699300699300699	0.00869032085788272	28.8247920115789	0.646603782980686
GRIA4	367	0.154121219391506	chr11:105940826:T:A	0.000379181764493031	0.771843947881932	24.9075428136344	1000	0.030969030969031	0.0293858917617207	189.856627651056	0.7812411586785
CNST	151	0.165881617170925	chr1:246581792:G:A	0.000531258559089309	0.800673989685731	22.8714984062697	1000	0.032967032967033	0.0311477862216367	97.317802075545	0.793263781354264
NAA40	31	0.723787644327972	chr11:63956703:G:A	0.00891646439538663	0.923857175602324	3.46937747904173	1000	0.033966033966034	0.0407121652552826	20.0138922492663	0.875756566727283
NUP160	84	0.453726628164374	chr11:47790381:A:G	0.00593389591048543	0.884988442552504	4.8010521535528	1000	0.042957042957043	0.0439085677929886	7.90983099540075	0.875756566727283
CZIB	12	0.375644025634707	chr1:53221917:T:C	0.00948819962967073	0.980543187177297	2.89612807604059	1000	0.030969030969031	0.0293539518745368	5.15293509960175	0.7812411586785
USP28	30	0.873984386065169	chr11:113840183:T:C	0.00375402071556841	0.909732352811341	4.17373932142483	1000	0.020979020979021	0.0232685122573819	19.0470507264137	0.7812411586785
GLIPR1L2	110	0.934361735456307	chr12:75422727:C:T	0.00327591119710058	0.873267854559156	3.87458920580487	1000	0.02997002997003	0.0227484620187242	14.1084744731585	0.7812411586785
LINC00173	2	0.94513000694445	chr12:116528489:G:A	0.00143452577167325	0.954517156833764	0.990221792772221	1000	0.003996003996004	0.0019137780542243	2.0885283946991	0.350359757080146
DOCK7	234	0.914026250369545	chr1:62689678:G:A	0.00358720244892718	0.858424749727825	6.46847143648241	1000	0.042957042957043	0.0409373910304181	81.3267344752947	0.875756566727283
POU6F1	47	0.139250014764942	chr12:51205468:C:T	0.00141603195365669	0.838853087136187	10.0863798037703	1000	0.02997002997003	0.0296861744906333	36.1569628794988	0.7812411586785
PAPOLA	6	0.148117955217575	chr14:96502831:C:G	0.00220891799897038	0.972209861699705	2.56295979097714	1000	0.00699300699300699	0.00656860654492476	5.6919335881869	0.610107631437423
GDAP2	20	0.758821828724236	chr1:117875866:C:A	0.0071059447974271	0.919441779001823	3.1876712512153	1000	0.02997002997003	0.031146915221561	13.5650156378746	0.793263781354264
KLF13	94	0.109779668126203	chr15:31337819:A:G	0.000485387613074373	0.864620765723533	15.4114863466063	1000	0.016983016983017	0.0151680357798022	41.0160869757334	0.772591241816377
LACTB	52	0.642318341992452	chr15:63124282:A:G	0.00557713519644365	0.905272824135145	4.1242366556875	1000	0.031968031968032	0.0335035657915598	5.85801669756571	0.805067353864509
ALDOA	4	0.930163741483242	chr16:30072731:A:T	0.0187498899662256	0.999598147027614	1.48620194070471	1000	0.034965034965035	0.027780027786524	4.70767449935277	0.7812411586785
EARS2	1	NA	chr16:23543439:C:A	0.00769071497809792	0.866511197599385	0.883712535543282	1000	0.014985014985015	0.013163760277706	0.529399486382802	0.692852582616592
NPRL3	1	NA	chr16:89369:G:A	0.025741034929964	1.00619132122765	0.998666266089449	1000	0.022977022977023	0.0251310881118449	1.25316668351491	0.7812411586785
OGFOD1	20	0.127338475930888	chr16:56452336:A:G	0.00220797471231249	0.855532836831197	5.15206039791488	1000	0.024975024975025	0.0225637952587646	11.632480998834	0.7812411586785
PRMT7	76	0.745131686445093	chr16:68322284:A:C	0.00213311454022669	0.841452404621998	5.1289577700997	1000	0.023976023976024	0.0233426558914857	34.7114006002744	0.7812411586785
RSPRY1	14	0.565650655141716	chr16:57239049:ACT:A	0.00178376341002973	0.889092577905091	2.8528680950069	1000	0.00799200799200799	0.0093700430117659	5.83868666887283	0.646603782980686
HP1BP3	52	0.816631903789173	chr1:20740508:G:A	0.00171018908780973	0.93698468725909	3.98335958841342	1000	0.011988011988012	0.00947685603541233	34.364665321509	0.646603782980686
ENDOV	37	0.453124250231342	chr17:80413707:C:T	0.00425380071889236	0.937533905741437	8.24099433619844	1000	0.038961038961039	0.0435106849463263	9.34561325311661	0.875756566727283
LINC02210	76	1	chr17:45618601:A:G	0.00934269004387001	0.867450556092672	2.77237760528059	1000	0.037962037962038	0.0430036524965805	10.6569921096166	0.875756566727283
MYO19	23	0.696221183922579	chr17:36513312:A:G	1.50678852111064e-05	0.918521478084174	2.92654908359739	1000	0.000999000999000999	0.000101863778535158	13.342803311348	0.0402107265767536
KDM5B	114	0.255247746596562	chr1:202788559:TGTATTG:T	0.00359610342873529	0.918241508934625	6.56232192410333	1000	0.026973026973027	0.0326131278380453	28.368023176988	0.805067353864509
SPECC1	428	0.357984893707384	chr17:20079448:C:T	0.000723074148842207	0.829506470068773	12.2865990823577	1000	0.022977022977023	0.0209585165926682	121.247551079591	0.7812411586785
HOMER3	23	0.276112481191631	chr19:18941335:T:G	0.00250164113737672	0.856114056316866	7.59934307577193	1000	0.036963036963037	0.0349372753681938	6.33585852384567	0.811264085387912
LOC101927151	461	0.107556037625101	chr19:27997382:T:A	7.81909301692529e-05	0.738919472567999	24.4690126805167	1000	0.00599400599400599	0.0106470540579467	78.4073557297389	0.646603782980686
MISP3	7	0.849211512400187	chr19:14075150:G:A	0.00483287066064797	1.00235568926396	2.2187970463359	1000	0.016983016983017	0.010572592117709	2.22121176322301	0.646603782980686
NDUFS7	13	0.650859623807042	chr19:1389518:C:A	0.0107947706300187	0.938939450263921	3.38678476800832	1000	0.046953046953047	0.044924814379297	7.83327975273132	0.875756566727283
NR1H2	14	0.8327518716984	chr19:50381628:C:A	0.00295438888500787	0.930216239043332	3.00298016300424	1000	0.01998001998002	0.0125207349826645	2.10436116059621	0.692852582616592
LYST	195	0.301303140156532	chr1:235824437:A:G	0.00060340694421479	0.800751384482784	13.7608531195595	1000	0.01998001998002	0.0229421518702608	105.974602639675	0.7812411586785
MARK1	87	0.647665981189872	chr1:220537597:T:C	0.00817757569020516	0.944317733253213	4.24853797623397	1000	0.036963036963037	0.0420434310655421	32.3522729555766	0.875756566727283
ZNF493	67	0.420195554232287	chr19:21431912:T:C	0.000904875579619047	0.890587303177156	3.2187276770786	1000	0.00699300699300699	0.00566729109836967	16.2656897584597	0.585500289713421
C2orf27A	149	0.231133941593544	chr2:131755807:C:A	0.000121308108492868	0.821809120038436	10.3214528341196	1000	0.003996003996004	0.00436147131659083	50.3252247373263	0.529751016068994
CFAP221	36	0.116877956189975	chr2:119610783:A:G	0.00329036734168064	0.867678406696781	7.83334975974242	1000	0.03996003996004	0.043205092740696	10.0649971961975	0.875756566727283
GREB1	156	0.0748298857633829	chr2:11594935:C:A	0.000363333011828115	0.805859224092713	27.4653595169034	1000	0.022977022977023	0.0259773405509125	115.601139461994	0.7812411586785
LYPD6	75	0.025904577431129	chr2:149467747:T:C	3.39565786600105e-09	0.784571714986615	12.0340343811078	1000	0.001998001998002	1.709149213368e-06	25.5813395778338	0.000899582202636024
MTX2	66	0.262704258289834	chr2:176327138:T:A	0.00154198457252119	0.848480566614645	5.77694359732694	1000	0.023976023976024	0.0189987453975008	43.7852287729581	0.7812411586785
NDUFA10	302	0.0291359820601862	chr2:239938500:A:G	0.000389557735596568	0.720396205004401	36.7884766946157	1000	0.047952047952048	0.0510229362074318	165.559867183367	0.876309469373782