geneId variants.cis LD best.snp best.nominal.pv shape1 shape2 nb.perm pv.emp.perm pv.emp.beta runtime fdr_bh ATP6V0B 4 0.721693183245168 chr1:43974474:G:A 0.0164664829321967 0.963370235206405 2.10097913392676 1000 0.04995004995005 0.0390674662956394 0.383152679602305 0.905181099312775 PDCD6IP 127 0.93903933855467 chr3:33796632:T:G 0.00175645465554053 0.872583368087304 5.19379371659438 1000 0.017982017982018 0.017181838409549 2.51159598032633 0.819290899122984 THUMPD3-AS1 22 0.641368514723107 chr3:9384227:G:A 0.00837478629975996 0.965391696504205 3.4428642233394 1000 0.036963036963037 0.0325835777153998 1.4298978527387 0.905181099312775 ABHD18 18 0.754748385408116 chr4:127963455:A:C 0.00651647239325059 1.00943055224861 2.90280433342843 1000 0.018981018981019 0.0180633643215768 0.875499407450358 0.819290899122984 COX18 6 0.500623736396094 chr4:73074748:T:A 0.0134199597190926 0.982567883932959 2.34819859687545 1000 0.038961038961039 0.0332994003652328 0.697211809953054 0.905181099312775 STMN1 28 0.795319046357515 chr1:25898142:A:G 0.00640312388871944 0.896990599854662 3.09123130008696 1000 0.031968031968032 0.0302297118437531 1.49418479601542 0.905181099312775 RGS12 120 0.154491255961844 chr4:3411886:G:A 7.15453341152417e-05 0.91844779969154 18.6746285804326 1000 0.004995004995005 0.00236116834923771 9.70982432762782 0.466331854898288 ZNF141 45 0.970278234803819 chr4:335897:G:A 0.00696770953501058 0.966002925956692 2.16368301238709 1000 0.021978021978022 0.0174382233940424 1.30046789646149 0.819290899122984 CAST 107 0.181579153499302 chr5:96738731:A:G 0.000942045838035144 0.817579332966706 16.6689620452037 1000 0.035964035964036 0.0353921222999026 7.01422602335612 0.905181099312775 RMND5B 7 0.125001255605195 chr5:178138643:C:T 0.00290260251290542 0.99280522346869 5.06395971146394 1000 0.021978021978022 0.0150983353909644 0.801444025834401 0.790548841070896 RNF180 140 0.706146012410666 chr5:64314288:AT:A 0.000413025292050229 0.922595607736888 4.10580987001221 1000 0.002997002997003 0.00283975288809647 4.8505250732104 0.466331854898288 DSE 74 0.124299930771893 chr6:116280369:A:G 1.67164395648012e-06 0.894840637186604 14.0553567735402 1000 0.000999000999000999 7.48255753355888e-05 4.27268699804942 0.0489733390571429 UBAP2L 47 0.584722471982646 chr1:154267451:C:T 0.000243167334216032 0.856023637016047 4.50670841149392 1000 0.002997002997003 0.00304412293898665 2.18815967639287 0.466331854898288 PCMT1 135 0.949308110325311 chr6:149816095:A:G 0.00919771987311191 0.973830786868159 3.59328204861597 1000 0.037962037962038 0.0359785603191431 2.35364225705465 0.905181099312775 PGM3 20 0.320000620973224 chr6:83146563:T:C 0.00159688784289813 0.944742839421306 3.71122869100913 1000 0.012987012987013 0.00797497768721645 1.02488902807236 0.67205302028361 PHACTR1 512 0.04520184325757 chr6:13053991:CAAA:C 0.000314405281350627 0.838983222028999 59.1559934703214 1000 0.041958041958042 0.0371384342994812 30.3581637938817 0.905181099312775 PPARD 7 0.913165251945137 chr6:35421254:T:C 0.0218002081884735 0.957969508173491 1.34573762129826 1000 0.031968031968032 0.0340342496921215 0.520734977722168 0.905181099312775 TRAF3IP2-AS1 58 0.131713246989321 chr6:111595470:C:A 0.000773964125382998 0.887839728281869 14.5636599354122 1000 0.01998001998002 0.0193043870815829 3.64552191495895 0.829194476662093 ERV3-1 40 0.782787894186499 chr7:64992360:G:A 0.000752090037790532 0.896608763108318 2.94859630693812 1000 0.00599400599400599 0.00427500554528606 1.1812385559082 0.466331854898288 POM121C 24 0.918702283468656 chr7:75417283:C:T 0.0119576151168772 1.02581110145022 3.48953862820644 1000 0.034965034965035 0.0375821001956197 1.09147711992264 0.905181099312775 RAPGEF5 247 0.0428494357544511 chr7:22263372:G:A 0.000412522064768384 0.794993963605716 49.8873586258169 1000 0.043956043956044 0.0485400551075661 20.0427618702253 0.924678943369087 BIN3 69 0.367500981026469 chr8:22669944:T:C 0.000790642249267171 0.766642615695829 6.89457263093011 1000 0.018981018981019 0.0196371495618983 5.10630542437235 0.829194476662093 MVB12B 127 0.057374395500233 chr9:126453279:G:A 2.18538155231096e-05 0.775634449469092 18.5616643183856 1000 0.001998001998002 0.002516824026236 7.13916447559992 0.466331854898288 PHF24 16 0.0958420068480231 chr9:34971966:C:T 0.000945182895418561 0.933549931930618 7.26444302152739 1000 0.011988011988012 0.00974953492222314 1.72725036541621 0.732942548723149 PHPT1 5 0.624991772088102 chr9:136849045:T:C 0.00502961288930392 0.979348272068661 2.72014198145664 1000 0.016983016983017 0.0149612944133161 0.679356189568837 0.790548841070896 USP20 10 0.056589442479489 chr9:129859824:C:T 0.000293257066269814 0.93022864328703 6.71111276183555 1000 0.002997002997003 0.00310852981222795 1.02165784041087 0.466331854898288 FRMD4A 905 0.0055663784731984 chr10:13791814:C:T 4.1055626860298e-05 0.740523325393083 162.991091184721 1000 0.024975024975025 0.0266645168803397 70.7930882016818 0.905181099312775 BACE1 26 0.396248310636781 chr11:117314918:C:T 0.000438466105094126 0.941794729169425 5.61008554770855 1000 0.00599400599400599 0.00355209049248188 2.11220479806264 0.466331854898288 GDPD5 91 0.597883887272272 chr11:75491148:A:T 0.000125579736683479 0.843128827211494 10.6608364908447 1000 0.004995004995005 0.00397905600085395 4.89128435055415 0.466331854898288 GVQW3 37 0.116424694708277 chr11:76399113:T:G 0.00265022710775353 0.791139054122412 7.21719640225751 1000 0.038961038961039 0.0461787783970573 3.13115539550781 0.924678943369087 NAA40 31 0.718646515223272 chr11:63943977:A:G 0.00541731437142312 0.93170671355868 3.16524272367317 1000 0.023976023976024 0.0229106512036764 1.4177165667216 0.856865528984536 NUP98 64 0.442748125867837 chr11:3670282:C:T 0.00233754193777391 0.859786629731436 8.57794929586612 1000 0.036963036963037 0.0360206032504767 4.5592067639033 0.905181099312775 RBM4 7 0.975430147703572 chr11:66633902:T:G 0.004645968063274 1.0111547775019 1.48796268738913 1000 0.00799200799200799 0.00652341208083277 0.386519141991933 0.609939029557864 DOCK7 226 0.944658195094706 chr1:62689678:G:A 0.000227753994277213 0.848803619082922 3.88980010695669 1000 0.001998001998002 0.00266880654600152 4.60824286142985 0.466331854898288 PLEKHA5 40 0.462023449467074 chr12:19369426:T:C 0.00318183312288545 0.84726621647683 6.57119830336118 1000 0.03996003996004 0.0392469027409908 3.58990524609884 0.905181099312775 TAOK3 88 0.450160697221666 chr12:118318909:C:T 0.00231684910462038 0.802556839010754 7.82537955465185 1000 0.041958041958042 0.0422113749879106 5.90298282702764 0.920911497652916 FAAP20 27 0.468836780595022 chr1:2179937:A:G 0.000333431539472517 0.866329913381611 6.67845477338332 1000 0.002997002997003 0.0052494025533888 2.33363525867462 0.528574457106611 ARMH4 234 0.0949951806601193 chr14:58032758:G:C 0.000138949813565881 0.809046756079532 22.6511186866128 1000 0.010989010989011 0.0100786599518844 14.9882788896561 0.732942548723149 FERMT2 32 0.33747545385484 chr14:52920118:G:C 0.00314157022290196 0.97214497700856 6.92679258961599 1000 0.022977022977023 0.024220034050747 1.76843681732814 0.856865528984536 MEG3 35 0.147823057332644 chr14:100837024:C:T 0.000523483289466276 0.888835596957739 12.1529166525907 1000 0.00799200799200799 0.0115730141792671 3.13199218908946 0.757453778033032 PPP2R5C 29 0.109740652298333 chr14:101845043:G:A 0.000671115788482335 0.845470289226829 7.81753371794781 1000 0.012987012987013 0.0123779010277047 1.93391013145447 0.771555830726926 CCDC32 65 0.611765944552725 chr15:40552023:G:A 0.00801364813405137 0.888167743734134 4.32186038561258 1000 0.048951048951049 0.0514393035981051 3.29054197072983 0.924678943369087 KLF13 126 0.0825932642085523 chr15:31408249:T:G 0.000500180476355805 0.803934080265763 17.0095430599995 1000 0.025974025974026 0.0230432756764684 7.95587831338247 0.856865528984536 LACTB 17 0.851241292126422 chr15:63141567:G:A 0.00407826114206089 0.913937820999208 2.9931613375488 1000 0.016983016983017 0.0181508296979118 1.37840618292491 0.819290899122984 NDUFAF1 11 0.915089189210019 chr15:41395571:C:T 0.0127372213855325 0.982365855863488 2.61948080277828 1000 0.042957042957043 0.0352148252105487 0.598680106798808 0.905181099312775 OTUD7A 220 0.0354918391265461 chr15:31522264:G:C 0.000484192367651737 0.848516398148353 31.899989944395 1000 0.030969030969031 0.0304661595817086 14.2582411885262 0.905181099312775 CLN3 22 0.805114926871981 chr16:28475892:G:T 0.00245164470350923 0.920484173705877 2.89603415937997 1000 0.013986013986014 0.0107061470992947 1.29978533585866 0.737597186998777 NMRAL1 29 0.836903502640977 chr16:4458605:T:C 0.0167144009762811 0.935403728644408 2.18331968147133 1000 0.04995004995005 0.045350098505971 1.79928826093674 0.924678943369087 PKD1P6-NPIPP1 8 0.710447325074819 chr16:15104741:C:T 0.0112023700265367 0.978679709785019 2.56394378555291 1000 0.036963036963037 0.0308681496853105 1.00153586069743 0.905181099312775 ATP5MC1 24 1 chr17:48889588:T:C 0.00586036059558359 0.944901606401302 1.8723245422215 1000 0.014985014985015 0.0141686394579715 0.399948255221049 0.790548841070896 CCDC57 397 0.902135580837611 chr17:82128519:T:C 0.00326891019800124 0.824597473209074 6.13042200323926 1000 0.040959040959041 0.0416060568227319 7.85797034899394 0.920911497652916 LINC02210 3 0.394411523240459 chr17:45623210:AG:A 0.0125840304950938 0.985163207867341 1.78912266330871 1000 0.025974025974026 0.0237592616953782 0.349858252207438 0.856865528984536 RAD51C 21 0.869055072633032 chr17:58688117:T:G 0.00994809070976765 0.981241289899687 1.96388788621495 1000 0.022977022977023 0.0210074545963685 0.6173388560613 0.856865528984536 RAD51D 12 0.282390764074848 chr17:35087739:C:A 0.0056903481107391 0.946880410676045 4.45711584695861 1000 0.035964035964036 0.0310306808783613 1.02645659049352 0.905181099312775 TRIM37 16 0.956036330024986 chr17:59080984:T:C 0.0228509330251503 0.985036939630666 1.74988035314672 1000 0.046953046953047 0.0417031071914759 0.915382397174835 0.920911497652916 MBOAT7 20 0.0714714382071985 chr19:54184080:A:T 0.00332226750986808 0.92798797761287 7.61083130573211 1000 0.034965034965035 0.033412323480256 1.46639106273651 0.905181099312775 ZNF577 110 0.637636976014808 chr19:51861294:T:G 0.00116535503310156 0.809763576674746 9.87350812958635 1000 0.023976023976024 0.0284511219037681 5.95051565965017 0.905181099312775 FAM228B 76 0.428319482423483 chr2:24152702:A:G 0.000853344799370603 0.878017956532104 8.43498162572824 1000 0.015984015984016 0.013640993596941 3.23222644726435 0.790548841070896 MIR4435-2HG 101 0.00980171484341068 chr2:111499702:T:C 0.000128042238366932 0.892474686014999 34.4645278531819 1000 0.00999000999000999 0.00821455181400898 8.21078356107076 0.67205302028361 MTX2 36 0.455486170824428 chr2:176331386:G:A 0.000367231065355966 0.905721816407779 5.32731540249764 1000 0.003996003996004 0.00362348943900586 2.7660903374354 0.466331854898288 SUMO1 26 0.606248260076093 chr2:202209822:C:T 0.00772651246677569 0.987877407644249 4.02063534588772 1000 0.038961038961039 0.0321440138118579 0.906341675917308 0.905181099312775 ATRN 237 0.577798047754297 chr20:3616999:T:C 0.00162280394419678 0.847039282458879 12.8744615875754 1000 0.033966033966034 0.0394158309097236 8.95144323905309 0.905181099312775 SYNGR1 68 0.34571931787981 chr22:39369599:C:G 0.00122099999629843 0.813510839507838 7.40506628250926 1000 0.02997002997003 0.0229427600783878 3.27830755710602 0.856865528984536