geneId	variants.cis	LD	best.snp	best.nominal.pv	shape1	shape2	nb.perm	pv.emp.perm	pv.emp.beta	runtime	fdr_bh
GET1	97	0.466092060950651	chr21:39400558:C:T	0.000168967284928545	0.811663291589525	10.1420060626065	1000	0.000999000999000999	0.00603596235047242	2.34979120492935	0.688099707953856
CHCHD10	3	0.302884293709346	chr22:23761300:C:A	0.00576108000818953	0.972087126193522	2.62820058052292	1000	0.021978021978022	0.0170551785396409	0.192551362514496	0.82445561488752
RANBP1	19	0.146612989137383	chr22:20116778:T:C	0.00748673390099963	0.960273143147457	4.55334092644754	1000	0.03996003996004	0.0389555990278762	0.588268228371938	0.830015537018517
MAGI1	1038	0.00582286027968212	chr3:65812809:G:C	3.22369738510186e-05	0.862356292082558	201.740930365833	1000	0.015984015984016	0.0136542113968857	41.746164059639	0.82445561488752
RO60	18	0.747028154146921	chr1:193070251:C:G	0.00344877124429488	0.904708485405327	4.20538933869706	1000	0.023976023976024	0.0221962183956366	1.12938369115194	0.82445561488752
TCAIM	54	0.479880145526751	chr3:44347400:A:G	0.0137964829097683	0.975317039611886	2.91582144202541	1000	0.044955044955045	0.0432556873682325	0.54559508562088	0.830015537018517
CC2D2A	134	0.16507386278766	chr4:15497719:T:C	0.000966067809768822	0.820546400766683	17.883434185259	1000	0.02997002997003	0.0377614159381022	3.86161247889201	0.830015537018517
FBXW7	24	0.938655897298304	chr4:152511416:CT:C	0.0102703081765229	0.875642781159693	2.33037261593756	1000	0.042957042957043	0.038800989994213	0.897277828057607	0.830015537018517
NSD2	3	0.0660507228490544	chr4:1985245:A:G	0.00845783790174104	0.998941956946821	2.41642671504667	1000	0.018981018981019	0.0204042870334104	0.195449356238047	0.82445561488752
RGS12	123	0.122274687013435	chr4:3432055:T:A	0.000463373107959852	0.804075710957824	18.1363626353449	1000	0.01998001998002	0.0228075310326951	4.27509970267614	0.82445561488752
RPS3A	1	NA	chr4:151098608:G:A	0.0375915067010643	1.0266415486682	1.02649852332876	1000	0.034965034965035	0.0353556485108926	0.095238717397054	0.830015537018517
TET2	93	0.352887759168979	chr4:105230954:T:G	0.000774955431228186	0.827903850134848	8.1835029158301	1000	0.010989010989011	0.0159557192408651	3.26285264889399	0.82445561488752
ANKHD1	65	0.269651650838758	chr5:140518717:G:A	0.00437860052709316	0.869793159249473	4.86252612308984	1000	0.038961038961039	0.0362243994991058	1.28762592871984	0.830015537018517
ERAP1	98	0.179715109319877	chr5:96773906:G:A	1.86378706565904e-05	0.796729851680159	12.9928450442742	1000	0.000999000999000999	0.00140491692589036	2.07360529502233	0.416417376833903
SUSD4	186	0.384608510637588	chr1:223301817:T:C	0.000117760957096591	0.797405562196994	12.2338721190408	1000	0.00799200799200799	0.00578518047985612	8.10665644804637	0.688099707953856
STARD4	8	0.819647279187002	chr5:111503564:A:G	0.00716823223211926	0.995368044917665	2.30903065119307	1000	0.024975024975025	0.0168073911115658	0.267373708883921	0.82445561488752
TCOF1	15	0.497660166404594	chr5:150364663:A:G	0.00389372608162175	0.934168417585493	4.24498106883166	1000	0.025974025974026	0.0219442624160254	0.605304010709127	0.82445561488752
TRIM52-AS1	10	0.98868656185291	chr5:181259493:AG:A	0.0419982269511789	1.06117297078033	1.32281809101671	1000	0.04995004995005	0.0459608236561804	0.185710569222768	0.830015537018517
ASCC3	403	0.649420808885961	chr6:100854947:A:T	0.00116003472236925	0.814089722567919	11.549329762671	1000	0.030969030969031	0.0315592001783758	6.47152941624323	0.830015537018517
RIPOR2	280	0.0144872724088784	chr6:25002205:A:G	0.000242712193251338	0.869270832398461	56.2218003970731	1000	0.020979020979021	0.0249578478081902	9.62939891417821	0.82445561488752
SYNCRIP	27	0.723258557695007	chr6:85626619:G:C	0.0117600156330269	0.948365377228852	2.61193089243831	1000	0.037962037962038	0.0368742940942966	0.622078271706899	0.830015537018517
ZNF184	96	0.752613463336649	chr6:27399042:C:A	0.00485452672396813	0.945076597980419	7.06572494051882	1000	0.043956043956044	0.0414608214479163	1.95820000569026	0.830015537018517
FBXL18	136	0.256139982801007	chr7:5492656:T:C	0.000832184718195461	0.798526391450419	20.6891674382277	1000	0.041958041958042	0.0414560230213705	5.74758843183517	0.830015537018517
LOC441204	183	0.0794902356284955	chr7:26541943:T:C	0.000113949919577583	0.819767055988429	31.2865644857305	1000	0.00999000999000999	0.0104697130767923	5.49932723045349	0.82445561488752
ZFAND2A	62	0.918907611612253	chr7:1152053:G:A	0.00309098691499821	0.849877709424811	3.99077224057305	1000	0.024975024975025	0.0247424228705128	0.958810150623322	0.82445561488752
EMC2	112	0.580793524282443	chr8:108484463:T:C	2.95015393463327e-05	0.930140688782521	4.64676436359909	1000	0.000999000999000999	0.000260634102666154	1.12666486104329	0.12875324671708
EXTL3	29	0.190469175564805	chr8:28753777:G:A	0.00237655766937339	0.882908059589178	7.82307185477196	1000	0.02997002997003	0.0305761370718897	1.3633269349734	0.830015537018517
MROH1	39	0.544858904095479	chr8:144169455:G:A	0.00108116080152354	0.866739689458624	7.57210217655565	1000	0.014985014985015	0.0161594205379241	1.51591984033585	0.82445561488752
SLC39A14	111	0.354500851601039	chr8:22411670:T:C	0.000347770037728345	0.7760285305169	9.30784279607742	1000	0.013986013986014	0.0125020915842427	2.79469447930654	0.82445561488752
FRMD3	440	0.0171201161804839	chr9:83367921:T:A	9.22867497646918e-05	0.736101005635148	59.1298777398503	1000	0.022977022977023	0.0234736578117364	12.6502544999123	0.82445561488752
CNNM2	151	0.673958152835871	chr10:103093746:A:T	0.00588040830787628	0.916553331460572	6.21932625398798	1000	0.04995004995005	0.0487978898489794	2.9906960050265	0.830015537018517
FRMD4A	1057	0.00419423809039807	chr10:13646051:C:T	8.23360479940138e-05	0.784491030481615	198.722275943747	1000	0.03996003996004	0.0424849638708866	70.463302620252	0.830015537018517
GSTO2	16	0.795022063027975	chr10:104278136:T:C	0.00455412134351196	1.00802916812216	3.4186567557973	1000	0.018981018981019	0.0149399175084307	0.842445456981659	0.82445561488752
PGAM1	6	0.326355161471665	chr10:97429204:C:T	0.00460567118152466	0.941872539612023	3.38827906132878	1000	0.018981018981019	0.0200822906578191	0.500644357999166	0.82445561488752
VTI1A	142	0.0101935220314125	chr10:112814868:A:C	0.000363261025914996	0.827563172098921	43.2676007872485	1000	0.037962037962038	0.0339626154628007	9.64076495170593	0.830015537018517
ATM	137	0.858093152624535	chr11:108259985:G:A	0.00694534107335909	0.894077962786605	4.63196252531973	1000	0.048951048951049	0.0471966057609482	4.34342256387075	0.830015537018517
C11orf1	20	0.968156936231716	chr11:111879706:A:G	0.00219380892418242	0.927062192320927	2.89668336988744	1000	0.00999000999000999	0.00933869905902708	0.714730477333069	0.82445561488752
PPFIA1	148	0.377528971585433	chr11:70346954:G:A	0.000608622002595927	0.883990534004578	5.44854926428336	1000	0.010989010989011	0.00665406367252874	3.69391681750615	0.704380168763399
USP28	28	0.897262219568444	chr11:113842668:C:G	0.00683362218284556	0.914852072060332	3.32847327697988	1000	0.031968031968032	0.0318589705258213	2.06966772079468	0.830015537018517
FGD4	484	0.0426004109595643	chr12:32609695:CT:C	0.000487128321942532	0.810769583077048	39.5871238927535	1000	0.040959040959041	0.0431242647286164	17.8797599752744	0.830015537018517
GLIPR1L2	110	0.914537272909667	chr12:75435801:A:G	0.00269947983555929	0.923881728688747	4.17005101673698	1000	0.018981018981019	0.0161277687158232	1.96141008933385	0.82445561488752
SLC25A3	8	0.44384418073892	chr12:98605333:C:T	0.00082872316489202	0.899186884575009	3.33240283390188	1000	0.002997002997003	0.00513007770515547	0.771862657864889	0.688099707953856
ZNF641	33	0.345888542253879	chr12:48347096:C:A	0.00477574668072811	0.894412432335284	4.86811738387967	1000	0.034965034965035	0.0353831347103126	1.12758449316025	0.830015537018517
PSPC1	46	0.865929372651716	chr13:19728834:T:C	0.0117907663096078	0.915791227611079	3.77388676509862	1000	0.04995004995005	0.0582822195405794	1.74941291014353	0.830015537018517
RCBTB2	2	0.0257347342774478	chr13:48517982:A:G	0.0124887070849802	1.06075879658607	2.04486112229147	1000	0.021978021978022	0.0200473456492932	0.199649532636007	0.82445561488752
TDRD3	146	0.392767206055848	chr13:60396407:T:C	0.00297551068857826	0.871165765154795	8.29876595808605	1000	0.03996003996004	0.041082182813472	3.88362611532211	0.830015537018517
FANCM	4	0.0907331340122215	chr14:45144309:T:C	0.00745136555967352	1.00270998969261	3.77458239397493	1000	0.028971028971029	0.0275456987052001	0.404730633894602	0.830015537018517
INF2	40	0.227580529857083	chr14:104685468:T:G	0.00180715997717584	0.887769169986598	11.7529864960316	1000	0.033966033966034	0.0337214699667273	3.12830332914988	0.830015537018517
KIAA0586	29	0.554408566815494	chr14:58471265:ACT:A	0.00525141259810458	0.907924819727292	5.54379109269756	1000	0.043956043956044	0.0410275909412671	2.46800783872604	0.830015537018517
NUDT14	30	0.919042660120354	chr14:105178084:G:A	0.00138660042933436	0.901772778282255	3.88611534515676	1000	0.010989010989011	0.00923325560235644	1.59637456734975	0.82445561488752
PPP2R3C	44	0.165637219760174	chr14:35089856:T:C	0.000872613260484933	0.850197013836119	6.75899456527383	1000	0.015984015984016	0.0133013861421752	1.53016140460968	0.82445561488752
CCDC32	65	0.525712341847468	chr15:40561493:C:T	0.000501201125471251	0.917261551834968	4.78793397778049	1000	0.002997002997003	0.0040495123346083	2.55691998402278	0.6668196977655
MORF4L1	23	0.314676168970351	chr15:78877157:C:T	0.00632716763710461	0.868966389113756	3.84918605158675	1000	0.034965034965035	0.0407121098406771	1.44202826420466	0.830015537018517
OTUD7A	488	0.0761831395570037	chr15:31491563:G:A	0.000202817246667042	0.760438556547608	35.9712376769773	1000	0.023976023976024	0.0255903902056855	15.7182817498843	0.82445561488752
GON4L	35	0.7093290051273	chr1:155775558:G:A	0.000140951519985055	0.875650681525174	3.74899427961578	1000	0.002997002997003	0.00139610683228921	1.06670163472493	0.416417376833903
SLC12A6	83	0.715903608922377	chr15:34287943:G:A	0.00312135330718255	0.923914123131024	5.55916748468161	1000	0.024975024975025	0.0240334956299937	3.56817166805267	0.82445561488752
GPATCH2	184	0.0230989180379244	chr1:217550585:G:C	0.000392847557494691	0.871148674438064	23.640977536314	1000	0.017982017982018	0.0177082380779486	7.87479828596115	0.82445561488752
TM2D3	22	0.291792986223242	chr15:101628575:A:G	0.00226583366278899	0.923252972096839	5.21047865241812	1000	0.020979020979021	0.0169222565642929	0.913476701577504	0.82445561488752
EARS2	1	NA	chr16:23538296:C:T	0.0242549195812867	1.05059412926455	1.04384780829795	1000	0.022977022977023	0.0209933808145733	0.107580439249674	0.82445561488752
PKD1P6-NPIPP1	16	0.62154164533659	chr16:15129796:T:C	0.00644878925923253	0.971186148562951	3.38141292623622	1000	0.025974025974026	0.0243567677307198	0.710716617107391	0.82445561488752
RPAIN	27	0.921538971485765	chr17:5418786:C:T	0.00229715878996639	0.846322600517164	3.15297620953798	1000	0.01998001998002	0.0159953471733074	0.508973975976308	0.82445561488752
BORCS8	39	0.671462386885387	chr19:19179021:A:G	0.00106907448251281	0.927919804895665	3.258691469706	1000	0.00899100899100899	0.00533276533867003	0.78072985013326	0.688099707953856
KLHL26	54	0.1914410296268	chr19:18671916:GCA:G	0.00260573515163087	0.928013384461604	10.219783485765	1000	0.038961038961039	0.0350582118202049	2.08984866937002	0.830015537018517
NFKBIB	21	0.254157186923304	chr19:38902858:A:G	0.000207888587753779	0.890003946669715	8.07529226382217	1000	0.001998001998002	0.00351399245930017	0.933476348718007	0.650967103085357
PET100	32	0.911505110096249	chr19:7629135:A:C	0.0123070847742319	1.02105332109535	3.70570109680111	1000	0.047952047952048	0.0417591083961736	0.713930014769236	0.830015537018517
PIN1	20	0.445703619300529	chr19:9831586:T:A	0.00413144875388571	0.958683768515957	4.08730256129356	1000	0.024975024975025	0.0201084355075049	0.729745769500732	0.82445561488752
SNRPD2	15	0.960540832827754	chr19:45693376:C:G	0.00917805599456045	0.944038500256487	2.96535959653665	1000	0.042957042957043	0.033478425094901	0.485938715934753	0.830015537018517
ZFP82	56	0.795183182302831	chr19:36390741:A:G	0.00406802757272962	0.861521214242251	5.46844270324002	1000	0.042957042957043	0.0389489678054051	1.22390567064285	0.830015537018517
ZNF626	176	0.556508053955475	chr19:20633766:T:C	0.0017407576105084	0.807647821495298	9.96607532592792	1000	0.040959040959041	0.0399470528250676	2.65407245556513	0.830015537018517
FAM228B	74	0.396223186979529	chr2:24159160:C:G	0.00057906804592367	0.870136028245801	7.94383166544151	1000	0.00799200799200799	0.00963488783493395	1.43313476641973	0.82445561488752
NME7	449	0.606650713285552	chr1:169147339:C:G	0.000926409896585878	0.860419776861555	9.99176735828362	1000	0.023976023976024	0.0185718915923486	6.57772070169449	0.82445561488752
OBSL1	45	0.371301271816962	chr2:219550873:GGA:G	0.00154137488995243	0.828257319501334	8.33284776389032	1000	0.027972027972028	0.0285026918111853	1.68274297316869	0.830015537018517
SLC35F5	110	0.343901399897244	chr2:113715597:C:T	0.00181015662791351	0.825034824915279	6.55453894900444	1000	0.032967032967033	0.0270517283247939	2.00777884324392	0.830015537018517
PHLDA3	17	0.382013227661646	chr1:201462119:T:C	0.000211445713681813	0.892715471247484	5.13164473295183	1000	0.003996003996004	0.00233038900279508	1.09771143992742	0.575606083690385
ZNF638	116	0.362409767515113	chr2:71404555:A:G	0.00223046225055956	0.868270701401249	7.70141986708735	1000	0.028971028971029	0.0304069086236064	3.1309977610906	0.830015537018517
DIDO1	47	0.280385538484322	chr20:62891787:G:T	0.00209719579677792	0.829757148576156	8.99159121515906	1000	0.040959040959041	0.0388547925993125	1.66805787881215	0.830015537018517
SAMHD1	29	0.367781192090585	chr20:36920429:G:C	0.00516519680741934	0.852164986418541	4.80133498202328	1000	0.048951048951049	0.0442908137687721	0.758284493287404	0.830015537018517
ZNF343	61	0.0889010755757511	chr20:2520225:C:T	0.00104148627494505	0.857081371860749	12.6257100604437	1000	0.023976023976024	0.0254995521896542	1.90263628562291	0.82445561488752