geneId	variants.cis	LD	best.snp	best.nominal.pv	shape1	shape2	nb.perm	pv.emp.perm	pv.emp.beta	runtime	fdr_bh
EPHA5	341	0.0503756384875051	chr4:65504369:T:A	0.000396591316001338	0.748322365359382	35.4480311997973	1000	0.046953046953047	0.0443819212525716	12.777835269769	0.998113883104025
NSD2	2	0.0475726386438514	chr4:1985211:G:A	0.00280673843153112	1.00839560804563	2.09078909137563	1000	0.00799200799200799	0.00560231803009262	0.320179216066996	0.992788453375201
PACRGL	47	0.426666815220253	chr4:20752311:A:G	0.00570396936720974	0.911071967362209	4.85089314394282	1000	0.037962037962038	0.0386971013199867	2.33729538520177	0.998113883104025
ANKHD1	43	0.397600401606426	chr5:140526696:T:TCTAA	0.0078753966943752	0.951336831845017	3.89787455911535	1000	0.040959040959041	0.0364761383981263	1.28889753421148	0.998113883104025
ARL10	12	0.0904922323968527	chr5:176383526:G:A	0.00390033637411635	0.970874655989176	6.82246612156347	1000	0.037962037962038	0.0295398519896836	0.999493141969045	0.998113883104025
ERBIN	9	0.174501559276605	chr5:66068864:CCT:C	0.00662332353822004	1.00177408806574	5.01506301422973	1000	0.035964035964036	0.0325609947681647	0.897359907627106	0.998113883104025
MAPK9	72	0.302762622201848	chr5:180263354:C:T	0.000803038331151695	0.824718356183253	16.0104069062316	1000	0.025974025974026	0.0291055343717088	4.05085744857788	0.998113883104025
SPEF2	186	0.190593999951961	chr5:35631950:G:A	0.000342382687099629	0.820819222112757	15.4688416171169	1000	0.013986013986014	0.0143547744654665	6.18282655874888	0.992788453375201
BAG6	18	0.444898866217676	chr6:31637671:C:G	0.00281178754986999	0.944948615933909	5.55704963998065	1000	0.021978021978022	0.0198726869950485	1.04289571444194	0.992788453375201
DTNBP1	27	0.420773667423484	chr6:15616461:G:A	0.00240817646486124	0.954481923853028	7.37073998779134	1000	0.01998001998002	0.0215006490448932	1.79162266651789	0.992788453375201
HMGCLL1	193	0.263295604088239	chr6:55521062:G:A	0.000414742334814089	0.833610277504121	15.7925964427112	1000	0.012987012987013	0.0159593847268033	6.62895776430766	0.992788453375201
MTRF1L	1	NA	chr6:153000350:T:C	0.00102029169727003	1.07325264849671	1.0197654141224	1000	0.001998001998002	0.000628775114296108	0.190606200695038	0.569291051409137
ATXN7L1	171	0.0165164888939582	chr7:105871671:T:C	0.00025956224276158	0.771083866848062	53.2507230735099	1000	0.045954045954046	0.0395600821712744	10.9598265171051	0.998113883104025
KCNH2	20	0.374278923082037	chr7:150976226:A:G	0.00280354862330445	0.892937851526361	5.2502477288794	1000	0.023976023976024	0.0237552257750585	1.30579175949097	0.998113883104025
NSUN5P1	5	0.601938162737895	chr7:75417283:C:T	0.0120605197155031	0.965235645168458	2.74521785462373	1000	0.036963036963037	0.0372052922580198	0.598083782196045	0.998113883104025
SDK1	802	0.0225759564891223	chr7:3661342:A:C	0.000184645516902004	0.78193414573871	110.442165257581	1000	0.047952047952048	0.0509326385352375	45.3849330385526	0.998113883104025
VPS50	36	0.716789372599232	chr7:93361809:T:C	0.00225376486003037	0.922184544318975	6.23133729307078	1000	0.022977022977023	0.0199604424354345	1.7412925084432	0.992788453375201
EMC2	27	0.364338627578967	chr8:108447103:A:G	0.00983313748814929	0.952676627052269	2.28528754799705	1000	0.031968031968032	0.0269977298578409	0.884445043404897	0.998113883104025
NSD3	1	NA	chr8:38374356:C:T	0.0019950659351009	1.00313174321411	1.02805148979843	1000	0.003996003996004	0.00201153905229776	0.182181199391683	0.844175888947627
ZFAND1	16	0.874496274764739	chr8:81709428:T:C	0.0135867977600177	0.977301879218854	2.2290440128775	1000	0.037962037962038	0.0326738396885629	0.65605940024058	0.998113883104025
CNNM2	66	0.982501680533296	chr10:103046897:A:C	0.00843087432940071	0.946826978395789	3.83141416407338	1000	0.040959040959041	0.0389113215230854	1.47241372267405	0.998113883104025
SPTLC1	43	0.42442498574731	chr9:92029453:C:T	0.00122675980039466	0.898490948448875	5.7976416052049	1000	0.00899100899100899	0.0120967562229501	1.94438586632411	0.992788453375201
DCLRE1C	16	0.458565114864764	chr10:14954652:C:T	0.0029585153654812	0.942945951520823	5.53152734937336	1000	0.020979020979021	0.0209390118158177	1.56178805828094	0.992788453375201
BLZF1	39	0.284543708413923	chr1:169384245:G:A	0.00274338008164743	0.922077601952922	4.08710643058576	1000	0.011988011988012	0.0162057037005222	0.739616052309672	0.992788453375201
LCOR	9	0.659735832664768	chr10:96865550:AC:A	0.0057079052615967	0.980009783816434	4.33035440474721	1000	0.027972027972028	0.0265280494998675	1.00843320687612	0.998113883104025
DNAJC4	2	0.476232639609254	chr11:64232057:C:T	0.00596166573151846	1.04417499255431	1.77611730461212	1000	0.00899100899100899	0.00857564798564812	0.275026118755341	0.992788453375201
THYN1	13	0.990584968267147	chr11:134254132:CTTGGTTGTTGTTGGG:C	0.0314243326134768	1.0306376452985	1.46115497569745	1000	0.046953046953047	0.0413183537197044	0.38202265103658	0.998113883104025
ATP5MC2	19	0.372030244329188	chr12:53679120:T:G	0.00436785586314659	0.910143283045431	4.35100146673847	1000	0.022977022977023	0.0276617488304497	1.16107091903687	0.998113883104025
DCP1B	55	0.411978773154137	chr12:2004182:A:C	0.00424360322574591	0.865024063491984	6.11458525057454	1000	0.042957042957043	0.0438415209120775	3.38596823612849	0.998113883104025
NDUFA12	43	0.500741493143728	chr12:94993780:C:T	0.00214256166255677	0.841701167555073	5.49620547851731	1000	0.025974025974026	0.0248156914711398	1.38877739111582	0.998113883104025
SCARB1	108	0.0241842245677337	chr12:124844387:G:A	0.00096097277592877	0.846694988534954	26.8599769612968	1000	0.043956043956044	0.0472124957087777	7.23260626792908	0.998113883104025
ZMYM5	3	0.811979503352932	chr13:19865323:C:T	0.00798238140445207	0.972988406489936	1.45147215333855	1000	0.012987012987013	0.013085937174284	0.342238831520081	0.992788453375201
CDKL1	60	0.160185036395199	chr14:50384793:T:C	0.00293737994692778	0.930919914138748	10.7144474517649	1000	0.041958041958042	0.0404061826872405	3.31010875701904	0.998113883104025
L3HYPDH	22	0.766382369294509	chr14:59473009:T:C	0.00771005905097844	0.986552199904652	3.40786402385421	1000	0.024975024975025	0.0274425301926693	0.982450977961222	0.998113883104025
MAX	76	0.53355151163251	chr14:65068673:G:C	0.00250411281023	0.895580872495823	4.93341861395583	1000	0.01998001998002	0.0200743094916197	3.42220798333486	0.992788453375201
ZC3H14	28	0.320927634605563	chr14:88601727:C:T	0.00179112397420478	0.904898162096416	5.57272100826283	1000	0.015984015984016	0.0158738550839132	1.60740222533544	0.992788453375201
COMMD4	1	NA	chr15:75340526:C:T	0.00776108167721046	1.04567062760479	1.06379966233597	1000	0.010989010989011	0.00662357572208049	0.201210192839305	0.992788453375201
HIVEP3	469	0.0469227924476995	chr1:41521203:T:G	0.000516163433593397	0.81478794774571	46.5247091192293	1000	0.046953046953047	0.0506009391233349	25.3128102223078	0.998113883104025
ELOB	4	0.00984905246941461	chr16:2771572:C:T	0.0086161235522042	0.974411104825152	3.95388759729658	1000	0.042957042957043	0.0369594095321941	0.538400411605835	0.998113883104025
IGSF8	10	0.57694803101271	chr1:160098839:A:C	0.00917294370673771	0.890384503785706	2.71492319454394	1000	0.048951048951049	0.0380031921753293	0.908566097418467	0.998113883104025
SPG7	104	0.938762356944556	chr16:89506257:A:G	0.000737210443904068	1.01224483755107	6.11053308997516	1000	0.001998001998002	0.00419059877313458	3.11379944483439	0.992788453375201
WDR59	160	0.0770602820306773	chr16:74927970:C:T	8.57935370766061e-05	0.825128447853119	19.8084478032941	1000	0.003996003996004	0.00550068523951602	9.74511642456055	0.992788453375201
NF1	211	0.924737148620365	chr17:31251706:C:T	0.00105644429265439	0.908231026181847	4.77319041006795	1000	0.00599400599400599	0.00840662646116372	4.38278141021729	0.992788453375201
ZNHIT3	17	0.824023774101967	chr17:36484820:G:A	0.00293139725759795	0.911340214083837	2.18614141688607	1000	0.015984015984016	0.01018896061631	0.809525144100189	0.992788453375201
ANKRD30B	132	0.241091203454564	chr18:14743552:C:T	0.00200108132656673	0.860655856370823	10.5241817295394	1000	0.040959040959041	0.0374613561518005	3.51921451886495	0.998113883104025
ZNF407	125	0.236881315093273	chr18:74679418:G:A	0.000411412874703698	0.787767772277036	13.1233632243146	1000	0.012987012987013	0.0174686182133537	4.64036556084951	0.992788453375201
ZNF420	82	0.841226869168772	chr19:37085802:G:A	0.00872938113426269	0.875609246666376	2.62152019835739	1000	0.035964035964036	0.0373903362664211	1.50817184448242	0.998113883104025
ZNF429	26	1	chr19:21511613:G:A	0.0160802353440579	0.963173659405606	1.50475970062975	1000	0.032967032967033	0.0277657779723552	0.528034468491872	0.998113883104025
ZNF529	62	0.323125778331258	chr19:36586270:A:G	0.0036879957807614	0.888696511265263	5.77588779731285	1000	0.037962037962038	0.0335653694278246	2.1736811598142	0.998113883104025
ANKRD44	187	0.0434106657777336	chr2:197273293:A:G	6.18446006346307e-05	0.902434396624535	28.75291104778	1000	0.002997002997003	0.00341844378766914	8.46626273393631	0.992788453375201
PHTF1	52	0.737289234362431	chr1:113754042:T:A	0.00316644939372956	0.884524203075852	4.10764225403645	1000	0.01998001998002	0.0220794890345557	1.71205164591471	0.992788453375201
SLC35F5	53	0.985583669694864	chr2:113725710:G:A	0.00030641009648269	1.02513965791946	3.53151037886483	1000	0.002997002997003	0.000904354331070909	0.771022117137909	0.569291051409137
PPT1	42	0.779072453646327	chr1:40087319:T:C	0.0120133793481924	0.872432486095543	2.85013279557254	1000	0.047952047952048	0.053697570267815	1.61715848843257	0.998113883104025
SOGA1	46	0.544282045898674	chr20:36855068:C:G	0.00171133624883346	0.863110129885923	6.62362334226975	1000	0.024975024975025	0.0217497895058705	2.06564335823059	0.992788453375201
ZMYND8	59	0.281816745865612	chr20:47268072:A:C	0.000703836271744973	0.860187867134939	7.49900610332138	1000	0.00699300699300699	0.0114658724254488	3.40973743597666	0.992788453375201
SGSM3	20	0.638116846284742	chr22:40401252:A:T	0.00489269542687953	1.02509619747593	2.97707556944572	1000	0.013986013986014	0.0129475870410204	0.896602217356364	0.992788453375201
THUMPD3-AS1	11	0.752988166843026	chr3:9395777:A:G	0.00421468353280652	0.971228475598607	2.99618069753313	1000	0.015984015984016	0.0143683202030702	0.875595696767171	0.992788453375201