geneId variants.cis LD best.snp best.nominal.pv shape1 shape2 nb.perm pv.emp.perm pv.emp.beta runtime fdr_bh UROS 59 0.945755053023672 chr10:125795634:C:T 0.00244184900482103 0.864474191579648 3.76788391379413 1000 0.021978021978022 0.0179522748723926 2.176269642512 0.955720050041658 GRIA4 302 0.156775672683217 chr11:105644237:C:A 0.000550890244207403 0.79268246597433 21.071424311423 1000 0.024975024975025 0.0311838567224147 11.1657411893209 0.955720050041658 PRDX5 2 1 chr11:64320170:C:T 0.049462168663149 1.01798359713334 1.02480054036659 1000 0.04995004995005 0.0480043763087319 0.19183589220047 0.978862124596088 KLRD1 77 0.448389417934539 chr12:10331658:T:G 0.00180644543419661 0.851575483673542 8.95222545099488 1000 0.037962037962038 0.0311025189366613 3.51586995522181 0.955720050041658 LARP4 1 NA chr12:50484672:C:G 0.0351604213954076 1.06326821408771 1.03382423591793 1000 0.02997002997003 0.0294323302021826 0.186503994464874 0.955720050041658 PPHLN1 137 0.567308517946076 chr12:42324159:G:T 0.00750104057558354 0.889310592287054 3.78491004377473 1000 0.048951048951049 0.0429773045175659 2.55840647617976 0.978862124596088 PTPN11 5 0.382721893903827 chr12:112433568:A:G 0.0174214814158844 0.995925744737185 2.48355040071924 1000 0.046953046953047 0.0433019691672838 0.395026755332947 0.978862124596088 EIF4G3 315 0.653749973752087 chr1:21105508:T:C 0.000695908831126912 0.775707995686225 6.16113818275639 1000 0.01998001998002 0.0155008065956383 8.36352199316025 0.955720050041658 FAAP20 29 0.334622082249602 chr1:2215707:T:C 0.000119820943984883 0.837768110938734 6.63302632495324 1000 0.002997002997003 0.00265820635753427 1.96256086031596 0.955720050041658 TM2D3 17 0.580170083682934 chr15:101651044:T:C 0.00330406006241035 0.947810486372324 4.68185261531181 1000 0.025974025974026 0.0194250450701136 1.11516695817312 0.955720050041658 DCTN5 8 0.960511370969824 chr16:23668965:A:G 0.0101518791508028 0.976701025618361 1.36510983339334 1000 0.022977022977023 0.0153180093257559 0.550405164559682 0.955720050041658 IGSF8 11 0.598565518176885 chr1:160094628:T:C 0.00710605358786265 0.873867835221888 3.42120147590584 1000 0.041958041958042 0.0398161207297623 1.06122154394786 0.978862124596088 PRKAR1A 90 0.114599586536557 chr17:68517978:C:T 0.00118242616501085 0.823625324736217 19.1276284005819 1000 0.043956043956044 0.046418663466156 5.24752625226975 0.978862124596088 YWHAE 62 0.479789211665461 chr17:1400484:C:G 0.000906090727074371 0.800359244703864 9.60509273264835 1000 0.024975024975025 0.0238093188044767 3.88363498051961 0.955720050041658 RNF165 79 0.0263109305760709 chr18:46395410:A:C 3.31513853305543e-05 0.93928821472349 24.7843948764655 1000 0.000999000999000999 0.00129406880693245 4.6614386677742 0.943376160253756 RPL28 20 0.187879235027745 chr19:55400964:C:T 0.00187092635273367 0.876255737231941 8.89911207449834 1000 0.032967032967033 0.0286029106028244 1.61905229489009 0.955720050041658 GLS 39 0.65690363287728 chr2:190877222:G:A 0.0060214219180017 0.907848239815961 4.88711249890635 1000 0.046953046953047 0.0414111717881203 2.62703276475271 0.978862124596088 LRATD1 13 1 chr2:14639705:A:G 0.0483128741526927 1.05476260011198 1.24457017820589 1000 0.04995004995005 0.0510243631476699 0.267357476552327 0.978862124596088 RGPD6 34 0.659378120262299 chr2:110110758:G:A 0.00408189525158098 0.876156003008701 5.01046294208828 1000 0.035964035964036 0.0340860374500454 1.56830207109451 0.955720050041658 RANBP1 11 0.11302264612675 chr22:20112229:G:T 0.0044992158232795 0.984984653621555 2.227150317934 1000 0.00999000999000999 0.0107423506374008 0.552846848964691 0.955720050041658 NCEH1 88 0.0410072761910961 chr3:172638484:C:T 0.000233103159483994 0.845225760511848 17.9972967627089 1000 0.011988011988012 0.0103106334429658 4.67274406353633 0.955720050041658 NISCH 56 0.816151202749141 chr3:52467600:G:C 0.00490726312002621 0.978664335049817 3.2428978842625 1000 0.02997002997003 0.0173898952723427 0.893151005109151 0.955720050041658 SCD5 94 0.0756835289642911 chr4:82721794:C:T 0.00236522954199703 0.943596819220763 11.3555535861287 1000 0.030969030969031 0.0332223384153501 4.65835486650467 0.955720050041658 ZNF141 56 0.921255544458171 chr4:357952:T:C 0.00859867557259442 0.937994339434418 3.63358505333688 1000 0.041958041958042 0.0389798810588574 1.44637808799744 0.978862124596088 ANKHD1 28 0.536911331866018 chr5:140488384:A:G 0.0115647768921651 0.933963188095127 3.55348591225429 1000 0.042957042957043 0.0509358676263438 0.863463123639425 0.978862124596088 ZFYVE16 10 0.304009713490673 chr5:80461479:A:G 0.00882105730470406 0.993398627765654 2.32255823331612 1000 0.022977022977023 0.0209285679310542 0.471544750531515 0.955720050041658 CEP85L 158 0.616188036648242 chr6:118709738:C:T 0.00231477537336133 0.882606803718911 7.89846563423952 1000 0.034965034965035 0.0301717106004405 3.50444536606471 0.955720050041658 RIMS1 390 0.0694103705311912 chr6:71974211:T:C 0.000333424374864499 0.804504019774789 29.1061875194708 1000 0.026973026973027 0.0255768965999315 12.3153820157051 0.955720050041658 ADAM22 218 0.49441778358322 chr7:88067366:A:G 0.000579623809122687 0.839490163356373 14.1431041606063 1000 0.023976023976024 0.0186525968797796 6.58961402575175 0.955720050041658 USP48 27 0.276342057930406 chr1:21720065:A:C 0.0032865031976631 0.912827854319534 6.97832989407689 1000 0.034965034965035 0.0324961118712549 1.64703418811162 0.955720050041658 DGKB 997 0.0156483292455322 chr7:14977398:C:T 5.863241373949e-05 0.753815989049453 121.013334967885 1000 0.01998001998002 0.025979132027998 53.7968773921331 0.955720050041658 RAPGEF5 182 0.0502333234372087 chr7:22118164:G:A 0.000345711853247277 0.866412261868958 42.6113854454213 1000 0.01998001998002 0.0270030213595427 12.0026093562444 0.955720050041658 OTUD6B-AS1 9 0.898361601624512 chr8:91064993:T:A 0.00709637604238744 0.994847422742156 1.87091079595034 1000 0.014985014985015 0.0135462229366791 0.450006238619486 0.955720050041658 YWHAZ 36 0.496402790862352 chr8:100915805:GCC:G 0.00377954643289846 0.923811563704592 5.29842052848356 1000 0.030969030969031 0.0274128662028165 2.03697525262833 0.955720050041658 NTRK2 176 0.0275398783456938 chr9:84726253:G:A 0.000927003532638304 0.834155647301931 24.9541973757876 1000 0.046953046953047 0.0453306023011447 11.1969037294388 0.978862124596088 FAM13C 53 0.876277279862272 chr10:59347125:A:T 0.000832368217200341 0.871235901336988 4.17793202671372 1000 0.00699300699300699 0.00746345325912137 1.70646254618963 0.955720050041658